strain	numRAYTs	NumREPINsLargestCluster	masterSequence	mastersequenceFreq	allREP	numberOfRepinClusters	allREPINs	REPINNumMasterDist_3
Smalt_PEG-141	4	166	TGCCGGCCAGCGGCCGGCACTTGCCGGCCAGCGGCCGGCACT	71	429	1	181	164
Smalt_FDAARGOS_1044	3	9	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	3	104	0	10	10
Smalt_NCTC13014	3	80	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	25	299	4	284	81
Smalt_W18	4	97	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	30	320	4	301	96
Smalt_FDAARGOS_325	2	13	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	8	126	1	14	14
Smalt_ICU331	2	263	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	112	739	5	616	263
Smalt_SJTH1	3	86	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	34	280	4	263	85
Smalt_SoD9b	2	177	TGCCGGCCAGCGGCCGGCACTTGCCGGCCAGCGGCCGGCACT	74	424	1	184	175
Smalt_SJTL3	2	220	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	93	535	4	495	225
Smalt_D457	3	174	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	90	471	3	410	177
Smalt_T50-20	4	234	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	111	581	4	519	235
Smalt_Sm53	3	262	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	113	756	8	739	266
Smalt_Col1	2	54	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	17	204	2	123	54
Smalt_PEG-68	3	167	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	82	465	3	400	171
Smalt_NCTC10257	3	9	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	3	104	0	10	10
Smalt_PEG-42	3	43	TGCCGACCGTTGGTCGGCACATGCCGACCAACGGTCGGCACC	14	99	2	96	46
Smalt_PEG-390	4	5	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	3	90	0	7	6
Smalt_NCTC10498	3	278	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	126	774	5	655	278
Smalt_NCTC10259	3	5	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	1	52	0	5	5
Smalt_NCTC10258	3	256	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	114	745	3	636	260
Smalt_PEG-173	4	165	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	73	427	2	368	167
Smalt_R551-3	2	6	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	2	60	0	6	6
Smalt_DHHJ	4	227	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	108	602	5	525	231
Smalt_O1	3	12	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	7	120	1	13	13
Smalt_U5	3	5	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	1	68	0	5	5
Smalt_sm454	3	10	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	5	114	0	11	11
Smalt_ISMMS2R	3	51	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	16	175	2	119	50
Smalt_AA1	4	29	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	21	291	2	44	44
Smalt_CF13	1	235	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	99	697	7	670	232
Smalt_X28	2	113	TGCCGGCCAGCGGCCGGCACTTGCCGGCCAGCGGCCGGCACT	64	321	1	127	119
Smalt_WP1-W18-CRE-01	3	57	TGCCGACCGTTGGTCGGCACATGCCGACCAACGGTCGGCACC	19	136	2	109	58
Smalt_CPBW01	3	50	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	14	170	2	116	48
Smalt_FDAARGOS_507	3	177	TGCCGGCCAGCGGCCGGCACTTGCCGGCCAGCGGCCGGCACT	86	516	1	200	176
Smalt_sm-RA9	2	128	TGCCGGCCAGCGGCCGGCACTTGCCGGCCAGCGGCCGGCACT	76	325	1	142	128
Smalt_ISMMS3	3	3	TGCCGACCAACGGTCGGCACCTGCCGACCAACGGTCGGCACC	1	58	0	3	3
Smalt_JV3	3	201	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	95	568	7	549	202
Smalt_SM866	4	247	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	120	647	5	580	246
Smalt_ISMMS2	3	51	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	16	175	2	119	50
Smalt_NEB515	2	248	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	123	782	8	759	267
Smalt_FDAARGOS_649	3	258	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	111	736	5	634	261
Smalt_K279a	2	51	TGCCGACCGTTGGTCGGCACATGCCGACCAACGGTCGGCACC	16	122	2	86	51
Smalt_CSM2	3	168	TGCCGGCCGCTGGCCGGCAACTGCCGGCCAGCGGCCGGCACT	67	467	4	408	166
Smalt_FDAARGOS_92	3	250	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	99	679	6	637	259
Smalt_KMM349	2	171	TGCCGGCCAGCGGCCGGCACTTGCCGGCCGCTGGCCGGCAAC	90	443	3	383	177
Smalt_SKK55	2	42	TGCCGACCGTTGGTCGGCACATGCCGACCAACGGTCGGCACC	14	94	2	91	44