strain	numRAYTs	NumREPINsLargestCluster	masterSequence	mastersequenceFreq	allREP	numberOfRepinClusters	allREPINs	REPINNumMasterDist_3
Nmen_M22822	2	174	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	73	455	3	288	149
Nmen_M25419	3	171	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	68	422	2	264	142
Nmen_M22425	2	110	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	53	432	2	269	104
Nmen_M09293	3	151	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	442	3	274	154
Ngon_FC460	1	74	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	8	147	1	77	41
Nmen_98-182	4	110	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	67	467	5	293	140
Nmen_M18727	2	174	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	71	417	3	261	133
Nmen_M22828	2	175	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	455	3	289	150
Nmen_331401	4	162	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	55	396	2	239	106
Nmen_12-221	4	150	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	62	455	4	285	136
Nmen_M01-240149	3	115	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	47	405	4	248	101
Nmen_95-134	4	104	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	65	454	5	279	134
Nmen_G2136	3	208	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	82	444	3	273	165
Ngon_TFG-A2	1	76	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	10	150	1	85	42
Nmen_M08000	3	179	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	75	443	4	275	155
Nmen_M08001	3	151	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	443	3	275	155
Nmen_09-292	3	137	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	61	447	4	268	125
Nmen_M24730	3	150	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	71	433	3	267	149
Nmen_M22811	2	203	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	101	497	2	315	177
Ngon_FQ04	1	72	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	9	155	2	90	43
Nmen_2594	3	129	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	45	378	2	227	96
Ngon_FQ02	1	29	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	8	145	3	83	26
Ngon_FQ01	1	66	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	9	151	2	83	40
Nmen_M22814	3	104	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	46	405	3	249	88
Nmen_M07161	4	181	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	75	448	4	277	157
Nmen_M22819	2	179	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	85	446	2	285	156
Nmen_COL-201504-11	3	179	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	71	430	2	268	138
Nmen_M12752	3	153	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	446	4	277	158
Nmen_M10208	3	173	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	70	421	2	265	146
Nmen_M07162	3	178	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	74	445	4	277	153
Ngon_FQ84	1	73	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	10	156	2	91	44
Nmen_alpha710	3	173	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	53	421	2	256	109
Nmen_M27559	3	149	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	68	427	3	264	149
Ngon_FQ82	1	71	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	9	153	2	89	43
Nmen_M22783	2	203	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	101	497	2	315	177
Nmen_FAM18	3	177	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	77	430	3	273	151
Nmen_M22801	3	181	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	75	443	4	275	156
Nmen_M22804	2	185	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	79	476	3	297	155
Nmen_13-600	4	150	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	62	449	4	279	136
Nmen_M21955	1	120	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	55	450	3	268	99
Nmen_M24705	2	193	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	84	485	2	304	164
Nmen_M22769	3	153	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	444	3	274	156
Ngon_RIVM0640	1	55	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	7	156	2	78	32
Nmen_M21717	3	135	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	66	408	3	255	130
Nmen_M22809	2	200	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	99	489	2	308	174
Nmen_M25087	3	149	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	68	427	3	264	149
Nmen_M23347	2	223	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	112	542	3	351	196
Nmen_M22772	3	153	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	73	445	3	276	157
Ngon_FC498	1	74	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	8	147	1	77	41
Ngon_FA6140	1	73	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	9	154	1	84	38
Nmen_M22759	3	181	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	75	444	4	274	156
Nmen_M01-240355	2	120	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	56	477	2	295	108
Nmen_053442	2	128	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	73	477	4	281	132
Nmen_WUE2121	3	169	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	80	408	3	254	144
Nmen_M07149	3	153	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	446	4	277	158
Nmen_MC58	1	107	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	58	456	2	272	100
Nmen_M25070	3	177	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	72	430	3	265	150
Nmen_M25472	3	176	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	71	427	3	264	149
Ngon_FDAARGOS_204	1	73	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	9	145	1	78	37
Ngon_FDAARGOS_205	1	87	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	9	165	1	95	41
Nmen_11-7	4	108	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	64	455	5	281	137
Ngon_FDAARGOS_207	1	81	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	10	158	1	84	40
Nmen_M21273	3	139	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	71	442	3	278	137
Nmen_M25476	3	150	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	68	430	3	265	150
Nmen_M25474	3	149	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	68	427	3	263	149
Ngon_FQ36	1	78	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	10	150	1	87	47
Ngon_FQ35	1	80	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	9	158	1	86	39
Nmen_M22745	3	151	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	443	3	275	155
Nmen_M22748	3	178	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	73	439	4	272	153
Nmen_M7124	3	172	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	72	446	4	277	151
Nmen_M0579	3	259	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	60	454	1	279	141
Nmen_DE8669	3	119	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	59	403	4	251	114
Nmen_Z2491	2	261	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	67	447	1	276	117
Ngon_1090	1	78	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	8	151	1	88	46
Nmen_M22191	3	151	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	441	3	275	155
Nmen_M25462	3	149	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	68	427	3	264	149
Nmen_11-14	4	149	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	61	454	4	282	137
Ngon_FC428	1	74	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	8	147	1	77	41
Nmen_38277	3	196	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	75	444	4	271	143
Ngon_NCCP11945	1	81	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	7	156	1	83	38
Nmen_NM3682	3	160	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	64	451	3	278	139
Nmen_DE8555	3	164	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	73	412	3	256	138
Ngon_FQ48	1	69	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	8	153	1	77	33
Nmen_M26417	3	158	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	70	437	3	270	138
Nmen_NM3686	3	145	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	69	440	3	264	144
Nmen_M04-240196	2	164	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	75	410	4	262	136
Nmen_M09261	3	179	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	75	442	4	274	155
Nmen_NM3683	3	178	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	74	451	3	278	152
Nmen_8013	2	259	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	97	490	3	303	173
Ngon_34530	1	72	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	7	153	1	76	32
Nmen_M26263	3	158	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	70	437	3	270	138
Nmen_M21374	3	135	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	65	425	2	266	133
Ngon_NG-k51_05	1	56	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	7	147	2	78	32
Nmen_M25459	3	176	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	71	427	3	264	149
Nmen_M22740	3	153	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	446	4	277	158
Nmen_M22189	3	181	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	75	446	4	274	156
Nmen_M25456	3	176	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	71	427	3	264	149
Nmen_M22722	3	153	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	446	4	277	158
Nmen_LNP21362	1	117	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	59	407	4	237	115
Nmen_M25438	3	149	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	68	427	3	264	149
Nmen_510612	4	143	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	58	390	3	239	109
Ngon_32867	1	74	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	10	148	1	84	43
Ngon_34769	1	79	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	8	154	1	83	35
Nmen_M22293	2	181	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	57	506	2	318	136
Nmen_FDAARGOS_211	2	194	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	87	555	4	349	153
Nmen_FDAARGOS_210	1	115	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	60	457	3	273	105
Nmen_FDAARGOS_212	3	194	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	87	485	3	297	165
Nmen_FDAARGOS_215	2	194	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	87	555	4	349	153
Ngon_FA19	1	91	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	9	172	1	93	44
Nmen_M25964	3	171	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	81	432	3	265	146
Ngon_NJ189125	1	74	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	8	147	1	77	41
Nmen_FDAARGOS_214	3	335	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	96	565	1	351	174
Nmen_alpha14	1	95	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	56	430	5	267	125
Ngon_RIVM0610	1	71	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	7	154	1	77	32
Ngon_TFG-B2	1	79	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	11	147	1	83	39
Ngon_FQ20	1	78	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	9	158	1	86	38
Nmen_L91543	3	167	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	75	418	3	262	139
Nmen_M22718	3	153	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	72	445	3	276	157
Nmen_14-563	4	148	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	61	450	4	281	134
Nmen_12-330	4	147	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	58	446	4	276	131
Nmen_12-176	4	148	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	61	452	4	282	134
Nmen_M18755	2	171	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	69	462	4	287	145
Ngon_NJ1711654	1	72	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	9	147	1	77	35
Nmen_FDAARGOS_209	3	123	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	59	431	3	273	113
Nmen_M22160	3	181	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	75	446	4	274	156
Ngon_MS11	1	80	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	11	156	1	89	36
Nmen_06-178	4	150	CATTCCCACGAAAGTGGGAATCATTCCCGCGCAGGCGGGAAT	62	453	4	283	134
Ngon_SS3160	1	73	CATTCCCGCGCAGGCGGGAATCATTCCCGCGCAGGCGGGAAT	9	146	1	76	41
Nmen_DE10444	3	99	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	42	375	3	230	100
Nmen_M23413	3	149	CATTCCCGCGCAGGCGGGAATCATTCCCACGAAAGTGGGAAT	68	427	3	264	149